CDS

Accession Number TCMCG016C16003
gbkey CDS
Protein Id OMO74049.1
Location complement(join(12005..12589,12760..12880,13109..13332,13540..13809,14111..14215))
Organism Corchorus capsularis
locus_tag CCACVL1_16992

Protein

Length 434aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011141.1
Definition Zinc finger, CCCH-type [Corchorus capsularis]
Locus_tag CCACVL1_16992

EGGNOG-MAPPER Annotation

COG_category A
Description Zinc finger CCCH domain-containing protein
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12872        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000387        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000974        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017069        [VIEW IN EMBL-EBI]
GO:0017070        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071006        [VIEW IN EMBL-EBI]
GO:0071007        [VIEW IN EMBL-EBI]
GO:0071012        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCACACATATTGTTAAAAGATCACGAGGCAGATGGTTGGGAACGGTCCGACTTCCCTATAATTTGTGAGTCATGCCTTGGTGACAATCCCAATGTCCGAATGACCAAAGCAGATTATGATAAGGAGTGCAAGATTTGTAAACGGCCATTTACAGTCTTTAGGTGGAGGCCTGGCCATGATGCAAGGTTTAAGCAACCTGTGGTTTGTCAGACATGCAGTAAGTTGCAAAATGCTTGTCAAGTCTGCCTGTTAGATCTTGAATCCGGGTTGCCTGTTCAAGTTCGGGACTCTGCTCTTAGTATAAATTCCAATGATGCCATTCCCAAGAGTGATGTGAATAGAGAGTATTTTGCTGAGGAGCATGACCGCAGGGGCAGAGCTGGTTTAGATTATGAGTCCTCATACGGAAAGGTACGGACCAATGACACTATTATGAAGCTTCAGAGAATAACACCCTACTATAAAAGAAACAGAGCACATATTTGCAGTTTCTATGTTCGTGGTGAATGTACAAGAGCTGCTGAGTGCCTTTATAGGCATGAGATGCCAGTAATTGGGGAATTGTCACAGCAAAATATAAAAGACCGTTATTATGGGGTGAATGATCCAGTGGCACTAAAGCTACTCAAAAAGGCTGGCGAAATGCCTTGCTTGGAACCTCCTGAGGATGAAAGCATTATAACCCTTTATGTGGGTGGTATTGGGATTGATAAAAGACTAATGTGGGGTAAGGGTAAGCCCCAAGCACCAAGACCAGAGTCAGAAACCTCAGGCTCAGAGGGAGCTAGGCAGCAAGCGACGGTGGCTCATAGTAGAATGTTGCCCCGGGCAGTGGCACCTCAGCTGGATAGAGCCTACTATCCATCAATGGATCCTCAAAAGATGGGTACCCTGGTTCCATCCCATGATGGCGAGAACAAATCTGGATCATCAGAAAAACAGCCACAAGGACATCATTATCCTTACCAAACTATGCTGCCACTACCACCCGGGCAGTATCATCATCAGCTGTATCCACCATATGGGTACATGCAACCAATGCCACTTTATCAGCAGTATCCGCCATATCATTCGGGAATGCCTCTACCTAGGGGTGGGTGTCGGTCGGGTTCGGTCGGGTCGGGGGGATTTTTTTTGAAATTGGGTTACCGACCGACGGTGAGATTGCCACCGATCACCGACCGACAGGTGATGGAAACCGCAATCCACCGACCGACGTTGGTTTCGGTCGGATGGTCGGTTTCCATCACCTGTCGGTTTCTTAAAAATCCAATTGAAAATTTGAATTTGTCAACTGTTTGA
Protein:  
MAHILLKDHEADGWERSDFPIICESCLGDNPNVRMTKADYDKECKICKRPFTVFRWRPGHDARFKQPVVCQTCSKLQNACQVCLLDLESGLPVQVRDSALSINSNDAIPKSDVNREYFAEEHDRRGRAGLDYESSYGKVRTNDTIMKLQRITPYYKRNRAHICSFYVRGECTRAAECLYRHEMPVIGELSQQNIKDRYYGVNDPVALKLLKKAGEMPCLEPPEDESIITLYVGGIGIDKRLMWGKGKPQAPRPESETSGSEGARQQATVAHSRMLPRAVAPQLDRAYYPSMDPQKMGTLVPSHDGENKSGSSEKQPQGHHYPYQTMLPLPPGQYHHQLYPPYGYMQPMPLYQQYPPYHSGMPLPRGGCRSGSVGSGGFFLKLGYRPTVRLPPITDRQVMETAIHRPTLVSVGWSVSITCRFLKNPIENLNLSTV